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Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/cpat/package.py | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/cpat/package.py b/var/spack/repos/builtin/packages/cpat/package.py new file mode 100644 index 0000000000..ef6415bfba --- /dev/null +++ b/var/spack/repos/builtin/packages/cpat/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Cpat(PythonPackage): + """CPAT is an alignment-free method to predict RNA coding potential using four sequence + features""" + + homepage = "https://cpat.readthedocs.io/" + pypi = "CPAT/CPAT-3.0.4.tar.gz" + + version("3.0.4", sha256="6d832f20729f8fc814384a27a4fcebcf81b11c0e6d80a404b4c4860d17e7d935") + + depends_on("py-setuptools", type="build") + depends_on("py-nose@0.10.4:", type="build") + depends_on("py-cython@0.17:", type="build") + depends_on("py-numpy", type=("build", "run")) + depends_on("py-pysam", type=("build", "run")) + + depends_on("r", type="run") |