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| author | George Young <A-N-Other@users.noreply.github.com> | 2023-09-18 17:37:21 +0100 |
|---|---|---|
| committer | GitHub <noreply@github.com> | 2023-09-18 11:37:21 -0500 |
| commit | ba81ef50f56126a3d01184d09f24dfac82dae084 (patch) | |
| tree | b733ecff1783c7eb3e5ad2c1fcfd5a1fb025acf6 /var | |
| parent | d5dd4b8b5dff5ae39789608295291996ae4e09c4 (diff) | |
| download | spack-ba81ef50f56126a3d01184d09f24dfac82dae084.tar.gz spack-ba81ef50f56126a3d01184d09f24dfac82dae084.tar.bz2 spack-ba81ef50f56126a3d01184d09f24dfac82dae084.tar.xz spack-ba81ef50f56126a3d01184d09f24dfac82dae084.zip | |
cpat: new package @3.0.4 (#40022)
* cpat: new package @3.0.4
* Update package.py
---------
Co-authored-by: LMS Bioinformatics <bioinformatics@lms.mrc.ac.uk>
Diffstat (limited to 'var')
| -rw-r--r-- | var/spack/repos/builtin/packages/cpat/package.py | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/var/spack/repos/builtin/packages/cpat/package.py b/var/spack/repos/builtin/packages/cpat/package.py new file mode 100644 index 0000000000..ef6415bfba --- /dev/null +++ b/var/spack/repos/builtin/packages/cpat/package.py @@ -0,0 +1,24 @@ +# Copyright 2013-2023 Lawrence Livermore National Security, LLC and other +# Spack Project Developers. See the top-level COPYRIGHT file for details. +# +# SPDX-License-Identifier: (Apache-2.0 OR MIT) + +from spack.package import * + + +class Cpat(PythonPackage): + """CPAT is an alignment-free method to predict RNA coding potential using four sequence + features""" + + homepage = "https://cpat.readthedocs.io/" + pypi = "CPAT/CPAT-3.0.4.tar.gz" + + version("3.0.4", sha256="6d832f20729f8fc814384a27a4fcebcf81b11c0e6d80a404b4c4860d17e7d935") + + depends_on("py-setuptools", type="build") + depends_on("py-nose@0.10.4:", type="build") + depends_on("py-cython@0.17:", type="build") + depends_on("py-numpy", type=("build", "run")) + depends_on("py-pysam", type=("build", "run")) + + depends_on("r", type="run") |